I don't putt well enough to be able to make a well informed comment, but wind definitely affects flop shots and to a lesser degree the pitch shots.
And speaking of wind (after playing SA in the high winds earlier) anyone notice it seem the wind is affecting the ball a lot more in flight?
Good example I can give (and got all three conditions the same today in the unlimited, singe am MR free tourneys) is #8 on SA. With a 30 and 31 MPH right to left, just about dead right to left wind, I usually play my shot just to the left of the bunker that's off to the right.
First time the ball (on a ding) lands 25 foot left of the flag, next two shots I play the line to the right side of the bunker, and even though I cam up a bit short, both shot were dead in line with the stick.